Package: incubate
Title: Parametric Time-to-Event Analysis with Variable Incubation
        Phases
Version: 1.4.1
Date: 2026-06-04
Authors@R: 
    person(given = "Matthias", family = "Kuhn",
           role = c("aut", "cre", "cph"),
           email = "matthias.kuhn@tu-dresden.de",
           comment = c(ORCID = "0000-0003-2868-5155"))
Description: Fit parametric models for time-to-event data that show an
        initial 'incubation period', i.e. a variable delay phase where
        no events occur. The delayed Weibull distribution serves as the
        foundational data model. For parameter estimation, different
        flavours of maximum likelihood estimation ('MLE') and the
        method of maximum product of spacings estimation ('MPSE') are
        implemented. Bootstrap confidence intervals for parameters and
        significance tests in a two group setting are provided.
License: LGPL (>= 3)
Encoding: UTF-8
LazyData: true
Imports: future (>= 1.21), future.apply (>= 1.6), glue (>= 1.4), MASS,
        minqa, purrr (>= 0.3), rlang (>= 0.4), stats, survival, tibble
Suggests: boot, dplyr, future.callr, ggplot2 (>= 3.3), knitr, numDeriv,
        patchwork, rmarkdown, spelling, testthat (>= 3.0.0), tidyr,
        withr
URL: https://gitlab.com/imb-dev/incubate/
BugReports: https://gitlab.com/imb-dev/incubate/-/work_items
Language: en-GB
Config/roxygen2/version: 8.0.0
Config/roxygen2/markdown: TRUE
Config/testthat/edition: 3
Config/Needs/check: spelling
Depends: R (>= 3.6.0)
Collate: 'S3_integration.R' 'aaa.R' 'cpp11.R' 'data.R' 'utils.R'
        'delay_estimation.R' 'delay.R' 'delay_test.R'
        'incubate-package.R' 'zzz.R'
VignetteBuilder: knitr
LinkingTo: cpp11
Config/pak/sysreqs: make
Repository: https://lenz99.r-universe.dev
Date/Publication: 2026-06-04 16:02:35 UTC
RemoteUrl: https://gitlab.com/imb-dev/incubate
RemoteRef: HEAD
RemoteSha: 4a5addb52759ea2b6bcc88e3d1fb1e7cf710eed2
NeedsCompilation: yes
Packaged: 2026-06-09 08:20:29 UTC; root
Author: Matthias Kuhn [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0003-2868-5155>)
Maintainer: Matthias Kuhn <matthias.kuhn@tu-dresden.de>